Software
iFit
The iFit library (pronounce [eye-fit]) is a set of methods to load, analyse, plot, fit and optimize models, and export results. iFit is based on Matlab, but can also be launched without Matlab license (stand-alone version).Matlab It does not currently include advanced graphical user interfaces (GUI), and rather focuses on doing the math right. Any text file can be imported straight away, and a set of binary files are supported. Any data dimensionality can be handled, including event based data sets (even though not all methods do work for these). Any model can be assembled for fitting data sets. Last, a number of routines are dedicated to the analyses of S(q,w) and S(alpha,beta). More advanced features include the full automation to compute phonon dispersions in materials, using DFT codes such as ABINIT, ELK, VASP, QuantumEspresso, GPAW and more (Models/sqw_phonons). The software can also compute the neutron TAS resolution function (4D) and fits to experimental data with full resolution convolution (ResLibCal). An interface for McStas and McXtrace is also available to automate and optimize instrument simulations.
jupyterlab-h5web
JupyterLab extension to explore and visualize HDF5 file contents, using the web-based viewer H5Web. H5Web supports the NeXus format.
myHDF5
myHDF5 is a free online service to explore and visualize HDF5 files. Users can choose to select files from their local machine, or to load files that are hosted remotely on platforms such as GitHub or Zenodo. myHDF5 is based on H5Web, an HDF5 file viewer and visualisation component library built with React and WebGL, as well as h5wasm, a WebAssembly-powered library for reading HDF5 files from JavaScript.
NAMD
NAMD is a parallel molecular dynamics code designed for high-performance simulations of large biomolecular systems.
vscode-h5web
VS Code extension to explore and visualize HDF5 files using the web-based viewer H5Web. H5Web supports the NeXus format.
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