ARCIMBOLDO

Ab Initio macromolecular phasing has been traditionally limited to small proteins at atomic resolution (1.2Å or better unless heavy atoms are present). ARCIMBOLDO constitutes a general method for 2Å data, based on combination of location of model fragments like small ?-helices with PHASER and density modification with SHELXE, distributed over a grid of computers.

Website	http://chango.ibmb.csic.es/arcimboldo
Licenses	Site or group licence
Categories	Crystallography
Software Requirements	Phaser Shelxe Python
Hardware Requirements	Running on a HPC grid
Platforms	Linux
Languages	Python
Input Formats	ASCII CCP4 HKLF
Output Formats	PDB HTML PHS
How-to
`setup.bor` `[LOCAL] python_local_interpreter: path_local_phaser: /mnt/hpcsoftware/share/phenix/phenix.phaser path_local_shelxe: /mnt/hpcsoftware/share/shelx/shelxe path_local_borges: /mnt/hpcsoftware/share/arcimboldo/BORGES_MATRIX path_local_arcimboldo: /mnt/hpcsoftware/share/arcimboldo/ARCIMBOLDO_BORGES [GRID] type_local: SLURM type_remote: SLURM`
Documentation / Tutorials
Online manual
References
Rodríguez, D.D.; Grosse, C.; Himmel, S.; González, C.; Ilarduya, I.M.; Becker, S.; Sheldrick, G.M. & Usón, I. "Crystallographic ab initio protein structure solution below atomic resolution". Nature Methods. 6(9), 651-653 (2009).
Instruments	BL13-XALOC (ALBA)

No screenshots have been uploaded for this software.

This software is used at these institutes

ALBA

https://www.albasynchrotron.es

No example datasets have been uploaded for this software.