Software
ANKAphase
ANKAphase processes X-ray inline phase-contrast radiographs by reconstructing the projected thickness of the object(s) imaged. The tool uses a single-distance non-iterative phase-retrieval algorithm described in a paper by D. Paganin et al. J. Microsc. vol. 206 (2002). It has an easy-to-use graphical user interface and can be run either as a standalone application or as a plugin to ImageJ. It works on powerful clusters but also on your office laptop.
PyHST2
Hybrid distributed code for high speed tomographic reconstruction with iterative reconstruction and a priori knowledge capabilities. PyHST2 (formerly known as PyHST) has been engineered to sustain the high data flow typical of the third generation synchrotron facilities (10 terabytes per experiment) by adopting a distributed and pipelined architecture. The code implements, beside a default filtered backprojection reconstruction, iterative reconstruction techniques with a-priori knowledge. The latter are used to improve the reconstruction quality or in order to reduce the required data volume and reach a given quality goal. The implemented a-priori knowledge techniques are based on the total variation penalisation and a new recently found convex functional which is based on overlapping patches.
PyMca
X-ray Fluorescence Toolkit (visualization and analysis of energy-dispersive X-ray fluorescence data). . The program allows both interactive and batch processing of large data sets and is particularly well suited for X-ray imaging. Its implementation of a complete description of the M shell is particularly helpful for analysis of data collected at low energies. It features, among many other things, the fundamental parameters method
tomwer
Tomwer is offering tools to automate acquisition and reconstruction processes for Tomography. It contains: - a library to access each acquisition process individually - gui and applications to control main processes (reconstruction, data transfert...) and execute them as a stand alone application. - an orange add-on to help users defining their own workflow (http://orange.biolab.si)
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