PHENIX is a software suite for automated macromolecular structure determination that can rapidly arrive at an initial partial model of a structure without significant human intervention, given moderate resolution and good quality data. This has been made possible by the development of novel algorithms for structure determination, maximum-likelihood molecular replacement (PHASER), heavy-atom search (HySS), template and pattern-based automated model-building (RESOLVE), automated macromolecular refinement (phenix.refine), and iterative model-building, density modification and refinement that can operate at moderate resolution (RESOLVE, AutoBuild). These algorithms are based on a set of crystallographic libraries that have been built and made available to the community.
|Licenses||GNU Lesser General Public License 2.1|
|Categories||Data analysis Crystallography Macromolecular Crystallography|
|Hardware Requirements||-||Platforms||Mac OS Linux Windows|
|Input Formats||There are no input formats associated to this software.|
|Output Formats||There are no output formats associated to this software.|
Installed on the central cluster (rnice) and runnable via:
|Documentation / Tutorials|
Acta Cryst. D66, 213-221, 2010) P. D. Adams, P. V. Afonine, G. Bunkóczi, V. B. Chen, I. W. Davis, N. Echols, J. J. Headd, L.-W. Hung, G. J. Kapral, R. W. Grosse-Kunstleve, A. J. McCoy, N. W. Moriarty, R. Oeffner, R. J. Read, D. C. Richardson, J. S. Richardson, T. C. Terwilliger and P. H. Zwart, "PHENIX: a comprehensive Python-based system for macromolecular structure solution."
|Instruments||ID23-1 (ESRF) ID23-2 (ESRF) ID29 (ESRF) ID30A-1 (ESRF) ID30A-3 (ESRF) ID30A-2 (ESRF) ID30B (ESRF)|